Structure and Mechanism in Biological Chemistry

 

"Mother Nature's Organic Chemistry"

The Laccase from T. versicolor

 

Spring Semester, 2009

MWF, 11:00 - 11:50 AM, 428 Aubert Hall
 

Instructor: Professor Ray Fort, 252 Aubert Hall
rcfort@maine.edu
Office Hours: all day, every day, no appointment needed

Basic Course Information

Course Syllabus Journal Resources Ideas for Papers
Our Discussion Center at Nature's Scitable Web Site

The first time you go to the site you will need to ask permission to use it.

And here are the course materials:

Basic Structures
 
Topic 1 - Nucleic Acids
Structure of DNA and RNA
Watson and Crick
The Code: Transcription and Translation Complications:
Introns, Exons, Transposons
What is a Gene?
Ancient DNA: Cave Men, Wooly Mammoths Mitochondrial and Y Chromosomal DNA Manipulating Genes
"Synthetic Biology"
Undergraduate Problem Set   Graduate Problem Set
 
 
Topic 2 - Proteins
Basics of Structure Folding Proteins Molecular Evolution
Conformational Changes Pores and Channels Predicting Protein Structure and Function
Problem Set Short Tutorial: Swiss PDB Viewer  
 
Topic 3 - Biosynthetic Pathways:
The Shikimate Pathway Squalene and Sterols Databases of Biosynthetic Pathways
  Problem Set  
 
Topic 4 - Enzyme Reaction Mechanisms
Basics Chorismate Mutase Squalene Cyclase
The Proteases Orotidine Decarboxylase How to Eat Wood
Database of Protease Enzymes Problem Set  
Tutorials
Tutorial: Sequence Alignment Working with Graphics Files Brief Jmol Tutorial

Useful Web Sites

Some of the pages on this site have embedded molecular structures that require Java for proper viewing and manipulation.

If you are using a Mac, you already have Java. PC users can download Java, FREE, from this site. Once you have installed it, it will be available automatically when it is needed.

The Adobe Shockwave Flash Player also is used on some pages.

Again, Mac users probably already have this installed, but may wish to upgrade to a newer version. PC users can download it for FREE by taking the link.


This page last modified 2:05 PM on Wednesday December 16th, 2009.
Webmaster, Department of Chemistry, University of Maine, Orono, ME 04469