| Exercise #1 (A few simple Linux file manipulations) | Exercise #2 (Learning to do molecular mechanics calculations with PCModel) |
| Exercise #3(Comparing structure file formats; using Jmol) | Exercise #4 (Introduction to SPARTAN; comparison of molecular mechanics force fields) |
| Exercise #5 (Working with AM1 and PM3 semi-empirical calculations) | Exercise #6 (Working with SPARTAN's ab initio module; comparing results with various basis sets |